The detailed information of tRNA gene sequence


Sequence ID>WENV170687369
Genome IDLFRM01190743
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 8271
End posion on genome 8195
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gctaccaatg
tRNA gene sequence 
GGACCCTTAGCTCAGTTGGTCAGAGCCACCGGCTCATAACCGGTCGGTCGTAGGTTCGAG
TCCTACAGGGTCCACCA
Downstream region at tRNA end position 
gttttaaaaa
Secondary structure (Cloverleaf model)
>WENV170687369	Met	CAT
                   g      ACCA gttttaaaaa
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     C - G
                     T - A          T G
                    T     C A T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        C     CGGTC
                    A - T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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