The detailed information of tRNA gene sequence


Sequence ID>WENV170687401
Genome IDLFRM01191356
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 534
End posion on genome 458
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttcatagtcc
tRNA gene sequence 
GGTCCCATAGCTCAGTCGGTTAGAGCACCTGACTCATAATCAGGGAGTCCTTGGTTCAAG
TCCAAGTGGGACCACAA
Downstream region at tRNA end position 
cttgtgtaaa
Secondary structure (Cloverleaf model)
>WENV170687401	Met	CAT
                   c      ACAA cttgtgtaaa
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     A - T          T G
                    T     G A A C C     A
      T G A        A      | | | | |     A
    C       C T C G       C T T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GAGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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