The detailed information of tRNA gene sequence


Sequence ID>WENV170687441
Genome IDLFRM01193015
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1754
End posion on genome 1830
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
taagtgttac
tRNA gene sequence 
GCAGTGGTAGTTCAGTTGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAG
TCCCGTCCACTGCGCCA
Downstream region at tRNA end position 
tattnnnnnn
Secondary structure (Cloverleaf model)
>WENV170687441	Asp	GTC
                   c      GCCA tattnnnnnn
                     G - C
                     C - G
                     A - T
                     G - C
                     T - A
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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