The detailed information of tRNA gene sequence


Sequence ID>WENV170687448
Genome IDLFRM01193293
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 76
End posion on genome 148
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
tcaaagattc
tRNA gene sequence 
GCACCTTTAGCTCAGTTGGTAGAGCAACTGACTCTTAATCAGTGGGTCCCGGGTTCGAAT
CCCTGAAGGTGCAtta
Downstream region at tRNA end position 
actcgggaaa
Secondary structure (Cloverleaf model)
>WENV170687448	Lys	CTT
                   c      Atta actcgggaaa
                     G - C
                     C - G
                     A - T
                     C - G
                     C - G
                     T - A
                     T - A          T A
                    T     G T C C C     A
      T G A        A      |   | | |     G
    T       C T C G       C C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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