The detailed information of tRNA gene sequence


Sequence ID>WENV170687454
Genome IDLFRM01193466
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1620
End posion on genome 1696
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
aagcgccgtt
tRNA gene sequence 
CGGACCATAGCGCAGTTTGGTAGCGCACTTGACTGGGGGTCAAGGGGTCGCGGGTTCAAA
TCCCGCTGGTCCGACAA
Downstream region at tRNA end position 
acaaatgccc
Secondary structure (Cloverleaf model)
>WENV170687454	Pro	GGG
                   t      ACAA acaaatgccc
                     C - G
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     A - T          T A
                    T     C G C C C     A
      T G A        A      | | | | |     A
    T       C G C G       G C G G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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