The detailed information of tRNA gene sequence


Sequence ID>WENV170687455
Genome IDLFRM01193559
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 459
End posion on genome 534
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
atttttgtat
tRNA gene sequence 
TCCTCCTTAGCTCAGTTGGTAGAGCATGCGGCTGTTAACCGCAGTGTCGTTGGTTCGAGT
CCAACAGGAGGAGCCA
Downstream region at tRNA end position 
tagttaagaa
Secondary structure (Cloverleaf model)
>WENV170687455	Asn	GTT
                   t      GCCA tagttaagaa
                     T - A
                     C - G
                     C - G
                     T - A
                     C - G
                     C - G
                     T - A          T G
                    T     C A A C C     A
      T G A        A      | | | | |     G
    T       C T C G       G T T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    T - A
                    G - C
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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