The detailed information of tRNA gene sequence


Sequence ID>WENV170687457
Genome IDLFRM01193649
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 615
End posion on genome 540
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position
gtcgttgggc
tRNA gene sequence
GGGGCTGTAGCGCAGTTGGGAGCGCGTCTCAATGGCATTGAGAAGGTCAGGGGTTCGAAT
CCCCTCAGCTCCACCA
Downstream region at tRNA end position
caggcgagtc
Secondary structure (Cloverleaf model)
>WENV170687457	Ala	GGC
                   c      ACCA caggcgagtc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          T A
                    T     T C C C C     A
      T G A        A      | | | | |     G
    T       C G C G       A G G G G     C
    G       | | | |                 T T
    G       G C G C
      G A          G     AGGTC
                    T - A
                    C - G
                    T - A
                    C - G
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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