The detailed information of tRNA gene sequence


Sequence ID>WENV170687478
Genome IDLFRM01194526
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 83252
End posion on genome 83327
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
ccgccgttga
tRNA gene sequence 
GCCCGGATAGCTCAGTCGGTAGAGCAGAGGATTGAAAATCCTCGTGTCGGCGGTTCGATT
CCGTCTCCGGGCACCA
Downstream region at tRNA end position 
tattttaaaa
Secondary structure (Cloverleaf model)
>WENV170687478	Phe	GAA
                   a      ACCA tattttaaaa
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T          T T
                    T     C T G C C     A
      T G A        A      | + | | |     G
    C       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    G - C
                    A - T
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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