The detailed information of tRNA gene sequence


Sequence ID>WENV170687564
Genome IDLFRM01199022
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 716
End posion on genome 640
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
atattaaaac
tRNA gene sequence 
GGGGGATTAGCTCAGCTGGCTAGAGCACCTGCCTTGCACGCAGGGGGTCAACGGTTCGAA
TCCGTTATTCTCCACTA
Downstream region at tRNA end position 
taaataaagg
Secondary structure (Cloverleaf model)
>WENV170687564	Ala	TGC
                   c      ACTA taaataaagg
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     A - T
                     T - A          T A
                    T     T T G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A A C G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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