The detailed information of tRNA gene sequence


Sequence ID>WENV170687679
Genome IDLFRM01205061
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1297
End posion on genome 1222
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
ttttatacat
tRNA gene sequence 
GCCCTCATAGCTCAGCAGGCAGAGCGCATCCATGGTAAGGATGAGGTCACCAGTTCGACC
CTGGTTGAGGGCTCCA
Downstream region at tRNA end position 
caatgggaag
Secondary structure (Cloverleaf model)
>WENV170687679	Thr	GGT
                   t      TCCA caatgggaag
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A
                     C - G
                     A - T          C C
                    T     T G G T C     A
      C G A        A      | | | | |     G
    A       C T C G       A C C A G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTC
                    C - G
                    A - T
                    T - A
                    C - G
                    C - G
                  A       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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