The detailed information of tRNA gene sequence


Sequence ID>WENV170687714
Genome IDLFRM01207173
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 512
End posion on genome 596
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttaactcaag
tRNA gene sequence 
GCCGGGGTGGCCCAGTCTGGTACGGCGTTGGCCTGCTAAGCCAATGATCCTTTGGATCTC
GCGGGTTCAAATCCCGTCCCCGGCGttt
Downstream region at tRNA end position 
aatctgatta
Secondary structure (Cloverleaf model)
>WENV170687714	Ser	GCT
                   g      Gttt aatctgatta
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G C C C     A
      T G A        G      + | | | |     A
    C       C C C G       G C G G G     C
    T         | | |                 T T
    G       C G G C
      G T A        G     TGATCCTTTGGATCTC
                    T - A
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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