The detailed information of tRNA gene sequence


Sequence ID>WENV170687754
Genome IDLFRM01209235
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 8869
End posion on genome 8945
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gccagttatt
tRNA gene sequence 
GGATCTTTAGCTCAGTTGGTTAGAGCAACCGGCTCATAACCGGTCGGCCCGGGGTTCGAG
TCCCTGAAGGTCCACCA
Downstream region at tRNA end position 
tttgggggta
Secondary structure (Cloverleaf model)
>WENV170687754	Met	CAT
                   t      ACCA tttgggggta
                     G - C
                     G - C
                     A - T
                     T + G
                     C - G
                     T - A
                     T - A          T G
                    T     G T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     CGGCC
                    A - T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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