The detailed information of tRNA gene sequence


Sequence ID>WENV170687756
Genome IDLFRM01209235
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 16380
End posion on genome 16470
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ctatactcat
tRNA gene sequence 
GGAGAGATGGTCGAGTTGGTTTAAGGCACCGGTCTTGAAAACCGGCGTACCTTTGCGGGT
ACCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
gttatagcga
Secondary structure (Cloverleaf model)
>WENV170687756	Ser	TGA
                   t      GCCA gttatagcga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    T T G A        G      | | | | |     G
  G         G C T G       G A G G G     C
  G           | + |                 T T
  T         A G G C
    T T A          A     CGTACCTTTGCGGGTACC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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