The detailed information of tRNA gene sequence


Sequence ID>WENV170687803
Genome IDLFRM01212199
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 3738
End posion on genome 3814
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
ataatcagat
tRNA gene sequence 
TCTTCAGTAGCTCAGTCGGTTAGAGCATCTGACTGTTAATCAGAGGGTCGTTGGTTCAAG
TCCAACCTGAAGAGCGA
Downstream region at tRNA end position 
aagagggtgt
Secondary structure (Cloverleaf model)
>WENV170687803	Asn	GTT
                   t      GCGA aagagggtgt
                     T - A
                     C - G
                     T - A
                     T - A
                     C - G
                     A - T
                     G - C          T G
                    T     C A A C C     A
      T G A        A      | | | | |     A
    C       C T C G       G T T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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