The detailed information of tRNA gene sequence


Sequence ID>WENV170687854
Genome IDLFRM01213861
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 4826
End posion on genome 4750
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tgccagtttt
tRNA gene sequence 
GGCTATGTAGCTCAGCTGGTTAGAGCACATCACTCATAATGATGGGGTCCCCTGTTCAAA
TCAGGGCATAGCCACCA
Downstream region at tRNA end position 
cttttctcac
Secondary structure (Cloverleaf model)
>WENV170687854	Met	CAT
                   t      ACCA cttttctcac
                     G - C
                     G - C
                     C - G
                     T - A
                     A - T
                     T - A
                     G - C          T A
                    T     G G G A C     A
      C G A        A      | | | | |     A
    T       C T C G       C C C T G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    A - T
                    T - A
                    C - G
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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