The detailed information of tRNA gene sequence


Sequence ID>WENV170687882
Genome IDLFRM01215067
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 103
End posion on genome 28
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
tagaaaccat
tRNA gene sequence 
GGGGAATTAGCTCAGCTGGGAGAGCGCATGGTTCGCAATCATGAGGCCAGGGGTTCGATC
CCCCTATTCTCCACCA
Downstream region at tRNA end position 
agaaagaccg
Secondary structure (Cloverleaf model)
>WENV170687882	Ala	CGC
                   t      ACCA agaaagaccg
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     A - T
                     T - A          C T
                    T     T C C C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGCC
                    C - G
                    A - T
                    T - A
                    G - C
                    G + T
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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