The detailed information of tRNA gene sequence


Sequence ID>WENV170687909
Genome IDLFRM01216941
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 134
End posion on genome 209
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position
tccggttgct
tRNA gene sequence
GGGGGTGTAGCTCAGTTGGGAGAGCACCTGCTTTGCAAGCAGGGGGTCATCGGTTCGAGT
CCGTTCACCTCCACCA
Downstream region at tRNA end position
gcaaactggt
Secondary structure (Cloverleaf model)
>WENV170687909	Ala	TGC
                   t      ACCA gcaaactggt
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     T T G C C     A
      T G A        A      |   | | |     G
    T       C T C G       A T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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