The detailed information of tRNA gene sequence


Sequence ID>WENV170687920
Genome IDLFRM01217369
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 603
End posion on genome 678
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
ggagttgctt
tRNA gene sequence 
GGGTTTGTAGCTCAGTGGATAGAGCGTCTGTCTCCGGAACAGAAGGTCGTGGGTTCGATC
CCCATCAAGCCCACTA
Downstream region at tRNA end position 
caggggttgc
Secondary structure (Cloverleaf model)
>WENV170687920	Arg	CCG
                   t      ACTA caggggttgc
                     G - C
                     G - C
                     G - C
                     T + G
                     T - A
                     T - A
                     G - C          C T
                    T     T A C C C     A
      T G A        A      + | | | |     G
    G       C T C G       G T G G G     C
    G       | | | |                 T T
    A       G A G C
      T A          G     AGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    T - A
                  C       A
                  T       G
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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