The detailed information of tRNA gene sequence


Sequence ID>WENV170687940
Genome IDLFRM01218613
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 341
End posion on genome 416
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
atttttatga
tRNA gene sequence 
TCCTCCTTAGCTCAGTCGGTAGAGCATGCGGCTGTTAACCGCAGTGTCGTTGGTTCGAGT
CCAACAGGGGGAGCCA
Downstream region at tRNA end position 
aagtcaaagt
Secondary structure (Cloverleaf model)
>WENV170687940	Asn	GTT
                   a      GCCA aagtcaaagt
                     T - A
                     C - G
                     C - G
                     T + G
                     C - G
                     C - G
                     T - A          T G
                    T     C A A C C     A
      T G A        A      | | | | |     G
    C       C T C G       G T T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    T - A
                    G - C
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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