The detailed information of tRNA gene sequence


Sequence ID>WENV170687941
Genome IDLFRM01218700
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 6989
End posion on genome 6913
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
gggtagacac
tRNA gene sequence 
GGGCTCGTGGTCTAGCTGGTTATGACGTCGCCTTGACATGGCGGAGGTCCTGAGTTCGAA
TCTCAGCGAGCCCATCA
Downstream region at tRNA end position 
ccgtttttga
Secondary structure (Cloverleaf model)
>WENV170687941	Val	GAC
                   c      ATCA ccgtttttga
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     G A C T C     A
      C G A        G      | | | | |     G
    T       T C T G       C T G A G     C
    G         | | |                 T T
    G       T G A C
      T T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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