The detailed information of tRNA gene sequence


Sequence ID>WENV170687976
Genome IDLFRM01220536
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 5468
End posion on genome 5393
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tttaaggtct
tRNA gene sequence 
AGGGGTATAGCTCAATTGGCAGAGCGTCGGTCTCCAAAACCGAAGGTTGAGGGTTCGATT
CCTTCTGCCCCTGCCA
Downstream region at tRNA end position 
ccacagtcac
Secondary structure (Cloverleaf model)
>WENV170687976	Trp	CCA
                   t      GCCA ccacagtcac
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     A - T          T T
                    T     C T T C C     A
      T A A        A      | | + | |     G
    T       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK