The detailed information of tRNA gene sequence


Sequence ID>WENV170687981
Genome IDLFRM01220795
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 39498
End posion on genome 39422
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
ttatataaaa
tRNA gene sequence 
GGGCGATTAGCTCAGTTGGTTAGAGCACCTGCCTTACAAGCAGGGGGTCATAGGTTCGAG
TCCTATATCGCCCACCA
Downstream region at tRNA end position 
tttatttgcc
Secondary structure (Cloverleaf model)
>WENV170687981	Val	TAC
                   a      ACCA tttatttgcc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          T G
                    T     T A T C C     A
      T G A        A      | | | | |     G
    T       C T C G       A T A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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