The detailed information of tRNA gene sequence


Sequence ID>WENV170687998
Genome IDLFRM01220894
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 11102
End posion on genome 11028
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
tatatagcgt
tRNA gene sequence 
GGCCCCTTGGTCAAGTGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATC
CCCTAGGGGTCACCA
Downstream region at tRNA end position 
ttttttttac
Secondary structure (Cloverleaf model)
>WENV170687998	Glu	TTC
                   t      ACCA ttttttttac
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     T C C C C     A
      T G A        G      | | | | |     G
    G       A C T G       A G G G G     C
    G         | | |                 T T
    T       A G A C
      T A          A     TAAC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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