The detailed information of tRNA gene sequence


Sequence ID>WENV170688013
Genome IDLFRM01221971
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 65930
End posion on genome 65856
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
agaattatgt
tRNA gene sequence 
GCGGAAGTAGCTCAGTGGTAGAGCATCGCCTTGCCAAGGCGAGGGCCGCGAGTTCGAATC
TCGTCTTCCGCTCCA
Downstream region at tRNA end position 
taatgaaatt
Secondary structure (Cloverleaf model)
>WENV170688013	Gly	GCC
                   t      TCCA taatgaaatt
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     T G C T C     A
        G A        A      + | | | |     G
      T     C T C G       G C G A G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGCC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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