The detailed information of tRNA gene sequence


Sequence ID>WENV170688015
Genome IDLFRM01222204
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 6736
End posion on genome 6826
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aataaagcat
tRNA gene sequence 
GGAGACGTATCGAAGTGGTCATAACGAGCCTGACTCGAAATCAGGTTGTCGGGTAACCGG
CACGTGAGTTCGAATCTCACCGTCTCCGCCA
Downstream region at tRNA end position 
acgagcctgt
Secondary structure (Cloverleaf model)
>WENV170688015	Ser	CGA
                   t      GCCA acgagcctgt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C A C T C     A
    G T G A        A      | | | | |     G
  G         A G C T       G T G A G     C
  T           | | |                 T T
  C         A C G A
    A T A          G     TTGTCGGGTAACCGGCAC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK