The detailed information of tRNA gene sequence


Sequence ID>WENV170688023
Genome IDLFRM01222794
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 5496
End posion on genome 5570
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
gtaaggatat
tRNA gene sequence 
TCCGCGATAGCTCAACGGTGGAGCACTCGGCTGTTAACCGATAGGTTGGAGGTTCGAATC
CTCTTCGCGGAGCCA
Downstream region at tRNA end position 
attataatat
Secondary structure (Cloverleaf model)
>WENV170688023	Asn	GTT
                   t      GCCA attataatat
                     T - A
                     C - G
                     C - G
                     G - C
                     C - G
                     G - C
                     A - T          T A
                    T     T C T C C     A
        A A        A      + | | | |     G
      C     C T C G       G G A G G     C
      G     | | | |                 T T
      G     G A G C
        T G        A     AGGTT
                    C   T
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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