The detailed information of tRNA gene sequence


Sequence ID>WENV170688031
Genome IDLFRM01223644
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 25773
End posion on genome 25848
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gcagattttt
tRNA gene sequence 
AGGGGAGTAGCTCAATTGGTAGAGCGGCGGTCTCCAAAACCGTAGGCTGCGGGTTCGATT
CCTGTCTCCCCTGCCA
Downstream region at tRNA end position 
tcataaaaca
Secondary structure (Cloverleaf model)
>WENV170688031	Trp	CCA
                   t      GCCA tcataaaaca
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T T
                    T     T G T C C     A
      T A A        A      + | + | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGCT
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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