The detailed information of tRNA gene sequence


Sequence ID>WENV170688074
Genome IDLFRM01226291
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1560
End posion on genome 1484
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
cactgaaatg
tRNA gene sequence 
GTGGCCGTGGCGAAGTTGGTTAACGCACCGGGTTGTGGCTCCGGCATTCGCGGGTTCAAG
TCCCGTCGGTCACCCCA
Downstream region at tRNA end position 
tttnntttta
Secondary structure (Cloverleaf model)
>WENV170688074	His	GTG
                   g      CCCA tttnntttta
                     G - C
                     T - A
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C          T G
                    T     T G C C C     A
      T G A        G      + | | | |     A
    T       A G C G       G C G G G     C
    G         | | |                 T T
    G       A C G C
      T T A        A     CATTC
                    C - G
                    C - G
                    G - C
                    G - C
                    G + T
                  T       C
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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