The detailed information of tRNA gene sequence


Sequence ID>WENV170688086
Genome IDLFRM01227516
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 56540
End posion on genome 56465
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aaggcgccgt
tRNA gene sequence 
AGGGGTATAGCTCAATTGGTAGAGTAGCGGTCTCCAAAACCGTTGGTTGCGGGTTCGATT
CCTGCTGCCCCTGCCA
Downstream region at tRNA end position 
aaaaacccaa
Secondary structure (Cloverleaf model)
>WENV170688086	Trp	CCA
                   t      GCCA aaaaacccaa
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     A - T          T T
                    T     C G T C C     A
      T A A        A      | | + | |     G
    T       C T C G       G C G G G     C
    G       | | | +                 T T
    G       G A G T
      T A          A     TGGTT
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK