The detailed information of tRNA gene sequence


Sequence ID>WENV170688090
Genome IDLFRM01227779
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 464
End posion on genome 538
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
acaggagtat
tRNA gene sequence 
TCCTCGATAGCTCAGCGGTAGAGCATCCGGCTGTTAACCGGAGGGTCGTAGGTTCGAATC
CTACTCGGGGAGCCA
Downstream region at tRNA end position 
acttttaaaa
Secondary structure (Cloverleaf model)
>WENV170688090	Asn	GTT
                   t      GCCA acttttaaaa
                     T - A
                     C - G
                     C - G
                     T + G
                     C - G
                     G - C
                     A - T          T A
                    T     C A T C C     A
        G A        A      | | | | |     G
      C     C T C G       G T A G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGTC
                    T - A
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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