The detailed information of tRNA gene sequence


Sequence ID>WENV170688132
Genome IDLFRM01229339
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 784
End posion on genome 870
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
atccgagagT
tRNA gene sequence 
GCCGGGATAGCCTAGCCAGGTAAGGCGCGGGACTTGAGATCCCGTGGAGATTCTCTCCGC
CTGGGTTCAAATCCCAGTCCCGGCGTtt
Downstream region at tRNA end position 
aaaacttttt
Secondary structure (Cloverleaf model)
>WENV170688132	Ser	TGA
                   T      GTtt aaaacttttt
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     G A C C C     A
      C G A        A      | | | | |     A
    C       T C C G       C T G G G     C
    A       | | | |                 T T
    G       A G G C
      G T A        G     TGGAGATTCTCTCCGC
                    C - G
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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