The detailed information of tRNA gene sequence


Sequence ID>WENV170688164
Genome IDLFRM01231551
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 4988
End posion on genome 5061
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
gatgcgttaa
tRNA gene sequence 
GCCTCAGTGGCTCAGCCGGTAGAGCGCGTCCTTGGTAAGGACGAGGTCGCGAGTTCGATT
CTCGCCTGAGGCTCtg
Downstream region at tRNA end position 
ggaaaagagg
Secondary structure (Cloverleaf model)
>WENV170688164	Thr	GGT
                   a      TCtg ggaaaagagg
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G
                     A - T
                     G - C          T T
                    T     C G C T C     A
      C G A        G      | | | | |     G
    C       C T C G       G C G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    C - G
                    G - C
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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