The detailed information of tRNA gene sequence


Sequence ID>WENV170688166
Genome IDLFRM01231591
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 8296
End posion on genome 8221
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
tgtattatgc
tRNA gene sequence 
GCCCAGATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATCCTCGTGTCGCTGGTTCGATT
CCGGCTCTGGGCACCA
Downstream region at tRNA end position 
gttttacccg
Secondary structure (Cloverleaf model)
>WENV170688166	Phe	GAA
                   c      ACCA gttttacccg
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C
                     A - T          T T
                    T     C G G C C     A
      T G A        A      | | + | |     G
    T       C T C G       G C T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    G - C
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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