The detailed information of tRNA gene sequence


Sequence ID>WENV170688172
Genome IDLFRM01231825
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 139
End posion on genome 211
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
aatatttgtt
tRNA gene sequence 
GGTTCCGTGGTCTAGTGGTATGATACCTCCCTTACAAGGAGGGGATCACGAGTTCGAATC
TCGTCGGAACCACtc
Downstream region at tRNA end position 
aaatctattt
Secondary structure (Cloverleaf model)
>WENV170688172	Val	TAC
                   t      ACtc aaatctattt
                     G - C
                     G - C
                     T - A
                     T - A
                     C - G
                     C - G
                     G - C          T A
                    T     T G C T C     A
        G A        G      | | | | |     G
      T     T C T G       A C G A G     C
      G       | | +                 T T
      G     T G A T
        T A        A     GGATC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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