The detailed information of tRNA gene sequence


Sequence ID>WENV170688181
Genome IDLFRM01232449
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 3204
End posion on genome 3129
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
aaaggtgtaa
tRNA gene sequence 
GCTCATGTAGCTCAGCTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCAGCGGTTCAATT
CCGCTCATGAGCTCCA
Downstream region at tRNA end position 
gtaataaggc
Secondary structure (Cloverleaf model)
>WENV170688181	Thr	GGT
                   a      TCCA gtaataaggc
                     G - C
                     C - G
                     T - A
                     C - G
                     A - T
                     T - A
                     G - C          T T
                    T     T C G C C     A
      C G A        A      | | | | |     A
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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