The detailed information of tRNA gene sequence


Sequence ID>WENV170688188
Genome IDLFRM01232641
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1184
End posion on genome 1260
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
accagcagtt
tRNA gene sequence 
GGGTCAGTAGCTCAGTTGGTTAGAGCACCGTCTTGATAAGGCGGGGGTCGCTGGTTCGAT
TCCAGCTTGACCCACCA
Downstream region at tRNA end position 
aacaggtttg
Secondary structure (Cloverleaf model)
>WENV170688188	Ile	GAT
                   t      ACCA aacaggtttg
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     A - T
                     G + T          T T
                    T     C G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       G C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    T + G
                    C - G
                  T       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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