The detailed information of tRNA gene sequence


Sequence ID>WENV170688194
Genome IDLFRM01233085
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 2091
End posion on genome 2016
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GGCCCGTTGGAGAAACGGTTAACTCACATGCCTTTCACGCATGCATTCACGGGTTCGAAT
CCCGTACGGGTCACCA
Downstream region at tRNA end position 
tatataaaat
Secondary structure (Cloverleaf model)
>WENV170688194	Glu	TTC
                   n      ACCA tatataaaat
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A          T A
                    T     T G C C C     A
      C A A        G      | | | | |     G
    G       A G A G       A C G G G     C
    G         | | |                 T T
    T       A C T C
      T A          A     CATTC
                    C - G
                    A - T
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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