The detailed information of tRNA gene sequence


Sequence ID>WENV170688220
Genome IDLFRM01234812
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 16038
End posion on genome 15963
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
agatgactga
tRNA gene sequence 
CGGGGTGTAGCGCAGCTGGGAGCGCGCGTGCTTTGGGAGCATGAGGTCGCAGGTTCAATC
CCTGTCACCCCGACCA
Downstream region at tRNA end position 
ttatttaata
Secondary structure (Cloverleaf model)
>WENV170688220	Pro	TGG
                   a      ACCA ttatttaata
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          C T
                    T     T G T C C     A
      C G A        A      + | | | |     A
    T       C G C G       G C A G G     C
    G       | | | |                 T T
    G       G C G C
      G A          G     AGGTC
                    C - G
                    G + T
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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