The detailed information of tRNA gene sequence


Sequence ID>WENV170688244
Genome IDLFRM01235144
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 2660
End posion on genome 2585
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
gccataactt
tRNA gene sequence 
GACCCATTAGCTCAGTCGGTAGAGCACCTGACTTTTAATCAGGGTGTCCCGCGTTCGAGT
CGCGGATGGGTCACCA
Downstream region at tRNA end position 
aaaaagctcc
Secondary structure (Cloverleaf model)
>WENV170688244	Lys	TTT
                   t      ACCA aaaaagctcc
                     G - C
                     A - T
                     C - G
                     C - G
                     C - G
                     A - T
                     T - A          T G
                    T     G G C G C     A
      T G A        A      | | | | |     G
    C       C T C G       C C G C G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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