The detailed information of tRNA gene sequence


Sequence ID>WENV170688259
Genome IDLFRM01236350
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 8112
End posion on genome 8198
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
atgttgattt
tRNA gene sequence 
GGTGAGGTGCCCGAGAGGCCAAAGGGGGCGGACTGTAAATCCGCTGGCAGATTGCCTTCG
AAGGTTCGAATCCTTCCCTCACCACCA
Downstream region at tRNA end position 
atatacatgt
Secondary structure (Cloverleaf model)
>WENV170688259	Tyr	GTA
                   t      ACCA atatacatgt
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T T C C     A
      A G A        G      | | | | |     G
    G       G C C C       G A A G G     C
    G         | | |                 T T
    C       A G G G
      C A A        G     TGGCAGATTGCCTTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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