The detailed information of tRNA gene sequence


Sequence ID>WENV170688264
Genome IDLFRM01236405
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 563
End posion on genome 638
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
tcatcaggaa
tRNA gene sequence 
GGGCGGTTAGCTCAGTTGGGAGAGCACCAGCCTTACAAGCTGGGGGTCACTGGTTCGAAC
CCAGTACCGCCCACCA
Downstream region at tRNA end position 
atcactatta
Secondary structure (Cloverleaf model)
>WENV170688264	Val	TAC
                   a      ACCA atcactatta
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          C A
                    T     T G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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