The detailed information of tRNA gene sequence


Sequence ID>WENV170688294
Genome IDLFRM01238303
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 729
End posion on genome 655
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
agtggcatat
tRNA gene sequence 
GGCCCCTTGGTCAAGCGGTTAAGACACCACCCTTTCACGGTGGTATCAGGGGTTCGAGTC
CCCTAGGGGTCACCA
Downstream region at tRNA end position 
tttttttcac
Secondary structure (Cloverleaf model)
>WENV170688294	Glu	TTC
                   t      ACCA tttttttcac
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T G
                    T     T C C C C     A
      C G A        G      | | | | |     G
    G       A C T G       A G G G G     C
    G         | | |                 T T
    T       A G A C
      T A          A     TATC
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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