The detailed information of tRNA gene sequence


Sequence ID>WENV170688296
Genome IDLFRM01238303
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 545
End posion on genome 469
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ttttcattgt
tRNA gene sequence 
GGCCTAGTAGCTCAGTTGGTTAGAGTGCCGGCCTGTCACGCCGGAGGTCGAGGGTTCGAG
TCCCTTCTGGGTCGCCA
Downstream region at tRNA end position 
ttatcaatta
Secondary structure (Cloverleaf model)
>WENV170688296	Asp	GTC
                   t      GCCA ttatcaatta
                     G - C
                     G + T
                     C - G
                     C - G
                     T + G
                     A - T
                     G - C          T G
                    T     T T C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G A G G G     C
    G       | | | +                 T T
    G       G A G T
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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