The detailed information of tRNA gene sequence


Sequence ID>WENV170688298
Genome IDLFRM01238303
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 352
End posion on genome 277
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
ttatgtttat
tRNA gene sequence 
GGGAGCATAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGGGTCACAGGTTCGATC
CCTGTTGTTCCCACCA
Downstream region at tRNA end position 
ttttcatcgt
Secondary structure (Cloverleaf model)
>WENV170688298	Val	TAC
                   t      ACCA ttttcatcgt
                     G - C
                     G - C
                     G - C
                     A - T
                     G + T
                     C - G
                     A - T          C T
                    T     T G T C C     A
      C G A        A      | | | | |     G
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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