The detailed information of tRNA gene sequence


Sequence ID>WENV170688343
Genome IDLFRM01240703
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1808
End posion on genome 1883
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
caaggacctt
tRNA gene sequence 
GTCTACGTAGCTCAGGGGATAGAGCACGCGCCTTCTAAGCGTGTGGTCGGGAGTTCGAAT
CTCTCCGTGGACGCCA
Downstream region at tRNA end position 
atattcaatc
Secondary structure (Cloverleaf model)
>WENV170688343	Arg	TCT
                   t      GCCA atattcaatc
                     G - C
                     T - A
                     C - G
                     T + G
                     A - T
                     C - G
                     G - C          T A
                    T     C T C T C     A
      G G A        A      | + | | |     G
    G       C T C G       G G G A G     C
    G       | | | |                 T T
    A       G A G C
      T A          A     TGGTC
                    C - G
                    G + T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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