The detailed information of tRNA gene sequence


Sequence ID>WENV170688353
Genome IDLFRM01241080
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 20446
End posion on genome 20373
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
gagcatccac
tRNA gene sequence 
GGGCTTGTGGTCTAGCTGGTCATGACGTCGCCCTTACACGGCGAAGATCCCCGGTTCGAA
TCCGGGCAGGCCCAttc
Downstream region at tRNA end position 
cagtatggcc
Secondary structure (Cloverleaf model)
>WENV170688353	Val	TAC
                   c      Attc cagtatggcc
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     T - A
                     G - C          T A
                    T     G G G C C     A
      C G A        G      | | | | |     G
    T       T C T G       C C C G G     C
    G         | | |                 T T
    G       T G A C
      T C A        G     AGATC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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