The detailed information of tRNA gene sequence


Sequence ID>WENV170688375
Genome IDLFRM01242060
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 578
End posion on genome 505
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
accatcagcT
tRNA gene sequence 
AGTCCCGTGGGGTAGTGGTAATCCTGCTGGGCTTTGGACCCGGCGACAGCGGTTCGACTC
CGCTCGGGACTATtc
Downstream region at tRNA end position 
atcaaccttt
Secondary structure (Cloverleaf model)
>WENV170688375	Gln	TTG
                   T      ATtc atcaaccttt
                     A - T
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     G - C          T C
                    T     T C G C C     A
      T G A        G      | | | | |     G
    G       T G G G       A G C G G     C
    G         | | +                 T T
    T       T C C T
      A A          G     CGAC
                    C - G
                    T + G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       G
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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