The detailed information of tRNA gene sequence


Sequence ID>WENV170688399
Genome IDLFRM01242971
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 204
End posion on genome 130
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
tccaagatat
tRNA gene sequence 
GCTCATGTAGCTCAGGGGTAGAGCACACCCTTGGTAAGGGTGAGGTCGTCGGTTCAATTC
CGACCATGAGCTCCA
Downstream region at tRNA end position 
cagattcaat
Secondary structure (Cloverleaf model)
>WENV170688399	Thr	GGT
                   t      TCCA cagattcaat
                     G - C
                     C - G
                     T - A
                     C - G
                     A - T
                     T - A
                     G - C          T T
                    T     C A G C C     A
        G A        A      | | | | |     A
      G     C T C G       G T C G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGTC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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