The detailed information of tRNA gene sequence


Sequence ID>WENV170688427
Genome IDLFRM01244832
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 177
End posion on genome 104
Amino Acid Arg
Anticodon ACG
Upstream region at tRNA start position 
cggcacgtgc
tRNA gene sequence 
GCGCCCGTAGCTCAATGGATAGAGCATCTGACTACGGATCAGAAGGTTGGGAGTTCGAGT
CTCTTCGGGCGCACac
Downstream region at tRNA end position 
tgtgttgaga
Secondary structure (Cloverleaf model)
>WENV170688427	Arg	ACG
                   c      ACac tgtgttgaga
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     T T C T C     A
      T A A        A      + + | | |     G
    G       C T C G       G G G A G     C
    G       | | | |                 T T
    A       G A G C
      T A          A     AGGTT
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       G
                    A C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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