The detailed information of tRNA gene sequence


Sequence ID>WENV170688487
Genome IDLFRM01248241
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 2058
End posion on genome 1974
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
actatatcaa
tRNA gene sequence 
GCAGGTGTGGCGGAATTGGCAGACGCACTAGACTTAGGATCTAGCGCTTGACGGCGTGGG
GGTTCGAGTCCCTTCACCTGCACCA
Downstream region at tRNA end position 
attaatctta
Secondary structure (Cloverleaf model)
>WENV170688487	Leu	TAG
                   a      ACCA attaatctta
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     T T C C C     A
      T A A        G      + + | | |     G
    T       G G C G       G G G G G     C
    G         | | |                 T T
    G       A C G C
      C A G        A     CGCTTGACGGCGT
                    C - G
                    T - A
                    A - T
                    G - C
                    A - T
                  C       A
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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